| AlbumTitle | Subtitle | Works | Performers | Record Label | Catalog No |
| Bolivian Baroque | Baroque music fromthe missions of the Chiquitos and Moxos Indians | 1. Beátus Vir (Zipoli); 2. Sonata Chiquitanas XVIII (Anon.); 3. Aqui Ta Naqui Iyai (Anon.); 4. In hoc Mundo (Zipoli); 5. La Folia (Anon.); 6. Aria In hac Mensa Novi Regis (Anon.); 7. Motet Caîma, Iyaî Jesus (Anon.); 8. Pastoreta Ychepe Flauta (Anon.); 9. Aria Ascendit Deus in jubilatione (Anon.); 10. Exaltate Regem Regum (Anon.); 11. Improvisation sikus (Suntura) | Katia Escolaro, Alejandra Wayar (sop), Gian-Carla Tsera (m sop), Henry Villca (ten), Florilegium | Channel Classics | CCS SA 22105 |
| The Jesuit Operas | Operas by Kapsberger and Zipoli | 1. Apotheosis sive consecratio SS. Ignatii et Francisci Xaverii (Kapsberger); 2. San Ignacio de Loyola (Zipoli) | Ensemble Abendmusikdir. James David Christie | Dorian Recordings | DOR-93243 |
| New World Symphonies | Baroque Music from Latin America | 1. Hanaq pachap kusikuynin (Anon.); 2. Kyrie from Missa ego flos campi (Gutiérrez); 3. Gloria from Missa ego flos campi (Gutiérrez); 4. Xicochi conetzintle (Fernandes); 5. Credo from Missa ego flos campi (Gutiérrez); 6. Los coflades de la esteya (Araujo); 7. Sanctus - Benedictus from Missa ego flos campi (Gutiérrez); 8. Versa est in luctum (Lobo); 9. Agnus Dei from Missa ego flos campi (Gutiérrez); 10. Salve Regina (Franco); 11. Qhapaq eterno Dios (Anon.); 12. Ut queant laxis (Araujo); 13. Kyrie from Missa San Ignacio (Zipoli); 14. Gloria from Missa San Ignacio (Zipoli); 15. Covidando esta la noche (Zespedes) | Ex Cathedra dir. Jeffrey Skidmore | Hyperion | CDA 67380 |
| Moon, Sun & All Things | Baroque Music from Latin America - 2 | 1. Ritual formulario: Hanacpachap (Anon.); 2. Deus in adiutorium (Juan Gutierrez de Padilla); 3. Dixit Dominus (Juan de Araujo); 4. Salga el Torillo (Diego J. De Salazar); 5. Beatus vir (Domenico Zipoli); 6. Viva Ignacio, viva! (Gaspar Fernandes); 7. Laudate Dominum (Francisco López Capillas); 8. Aquí, Valentónes de nombre! (Juan de Araujo); 9. Beloved Mother of God (Hernando Franco); 10. Ave maris stella (Domenico Zipoli); 11. Magnificat (Francisco López Capillas); 12. Cui luna, sol et omnia (Francisco López Capillas); 13. Albricias mortales que viene la aurora (Manuel de Sumaya); 14. Sancta Mariae (Francisco Hernández); 15. Ay andar (Juan de Araujo); 16. Dulce Jesús mío "Y yaî Jesuchristo apoquîrui" (Anon.) | Ex Cathedra dir. Jeffrey Skidmore | Hyperion | CDA67524 |